Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929848.1_cds_XP_016477058.1_68829
CDS Infomation

[gene=LOC107798559] [db_xref=GeneID:107798559] [protein=pumilio homolog 12-like] [protein_id=XP_016477058.1] [location=complement(join(28236..28382,29878..30136,30230..30393,33541..33703,33791..34656))] [gbkey=CDS]
Sequence

ATGGACCAATGGGGAAGGAGAAACCTTTATTTTCCGGCGTCTCAACCGCACCCGGAAGAG
ACGCCGGAAAATAACTCCGACCACCCACCTCGTCTGCACGGCTACCATGAGTTAACCCCC
ACAAACATTCTTCCGCTTGCATCGGCCTTCGCCGGTTTAAGTCTTACAGGCGATCAGCCA
AGAACGCCGTCGTTCGGTATCCCTCCGCCGGCGGGGAGTTCAATTGATGAGTTCTTGGAC
CCTACCGTTGATTGCTTGATGGGCTTTAGAGCCAATGCTGAGTTGCAGCAGGGTTTAATC
CGGGCCCACCAGAATAATGGGGCCCACCAGAATCTTAGTGTGGGCCCGGGTATTCGGGCA
AACATTCTCCGAGGAATGTATCCATGGTACCCACAACTGTGCGGTGAAAACTTCTGGAGA
TGGAATTATGACGTGGCAAACTACAATGGCTTGCATAGCAAGGAACCCATTCCACAGTTC
CCAATTCTGCCATGTTTAAACCAGAATTCTAGTATTATTTCAAACGGTGTTTCTTATAAC
TATACGTTTGTACCAAGAAATTTGAAGAACAATCAATCTGTTTTATTGGGTGATAATGAT
TTGAGAGGAAAAGTGGTTGCTTTAGCAAAAGATCAACAAGGGAGCAAAATGCTACAATCT
AAGCTTGAGAAAGGGAAGAAGGAAGAAATTGAAGTTATACTTAGCGAGGTGATTGACTGT
GTTACTGATCTGTTAAAGAATCAGTCTGGGAGTTACGTTATTCAGAAGCTATTTGTTGTG
TGTAATGAGGAACAGAGGACAACTATTATTCAGGCTATAACAAGAACTACCCTCCAGTTT
GTTAATATATGTTTCAGCCAACATGGGGCTCGAGCAATGCAGAAATTGTTGGAGAACCTT
AGTACTCCGCAGCAAACGTCGTTGATAATATCAGCTTTAACTCCAGTTGCTGTTGCATTG
ACCAATGATCAAAGTGGTCATCATGTTTTACAATATTGTGTCAAGACATTCTCTATTGAG
TACACCAGGCATCTTCTCAATGAAATTGCAAATAACTGCTTTACAATTGCAACCCAAAAA
AGTGGGTGCTGTGTGCTTCAGTCATGTGTAGAATTCTCTCATGGAGAACTCAGAGATCGC
CTTATAACTGAGATCTTGACAAATGCAGTGCATCTATCAGAAGATCAATACGGCAACTAT
GTGGTGCAACACCTTGTGGGACTGAAGTTACCAAGAGTTACTGAAACTTTACTGGAAAGG
CTTCAAGGAAGCTTTGTGACTCTCTCATGCAATAAGTATGCTAGTAATGTTGTTGAGAAA
ATCATCCTCGAGTCCGGAGAAGAGCACTCCACAAAAATTATTGCCGAGTTGCTCAGAAGT
CCAAGTGCTTCAATGCTCCTAGTGGACCCTTACGGTAACTTTGTCATCCAGACAGCATTG
CAAGTTTCAAAGGGCCACATCTTCAATGCTCTCTGTAAGCTAATCTACATGAATTCTGCA
TCAATGCAAAGTAACATTTACGGGAAGAAGATCCTTGATCGGTTGTGTAGCAAGAAGGAA
CCTCTACATTGTACAAGATTGTACAAGCGACAGGTATAA

Peptide Sequence

PEP ID

XP_016477058.1
PEP Infomation

PREDICTED: pumilio homolog 12-like [Nicotiana tabacum]
Sequence

MDQWGRRNLYFPASQPHPEETPENNSDHPPRLHGYHELTPTNILPLASAFAGLSLTGDQP
RTPSFGIPPPAGSSIDEFLDPTVDCLMGFRANAELQQGLIRAHQNNGAHQNLSVGPGIRA
NILRGMYPWYPQLCGENFWRWNYDVANYNGLHSKEPIPQFPILPCLNQNSSIISNGVSYN
YTFVPRNLKNNQSVLLGDNDLRGKVVALAKDQQGSKMLQSKLEKGKKEEIEVILSEVIDC
VTDLLKNQSGSYVIQKLFVVCNEEQRTTIIQAITRTTLQFVNICFSQHGARAMQKLLENL
STPQQTSLIISALTPVAVALTNDQSGHHVLQYCVKTFSIEYTRHLLNEIANNCFTIATQK
SGCCVLQSCVEFSHGELRDRLITEILTNAVHLSEDQYGNYVVQHLVGLKLPRVTETLLER
LQGSFVTLSCNKYASNVVEKIILESGEEHSTKIIAELLRSPSASMLLVDPYGNFVIQTAL
QVSKGHIFNALCKLIYMNSASMQSNIYGKKILDRLCSKKEPLHCTRLYKRQV

Transcript Sequence

Gene sequence data has not been registered.